Sunday, April 26, 2020

Dr Kamran Khan - the Epidemiologist who Sent the First Warnings of the Wuhan Virus

Nine days before the World Health Organization alerted the world to the threat posed by COVID-19, an artificial intelligence-powered startup led by the University of Toronto’s Kamran Khan had already spotted the first signs of an unusual outbreak.

In an interview with CNBC, Khan explained how his company, BlueDot, was able to scour big data and spot the emergence of the novel coronavirus before anyone else. 

He said BlueDot uses machine learning and natural language processing to comb through masses of data, which are then reviewed by doctors and computer programmers who create threat reports.

“We don’t use artificial intelligence to replace human intelligence, we basically use it to find the needles in the haystack and present them to our team,” said Khan, an associate professor at the Institute of Health Policy, Management and Evaluation at the Dalla Lana School of Public Health and an infectious disease physician at St. Michael’s Hospital.

He said his experience treating patients during the SARS outbreak in 2003 inspired him to start BlueDot.

“What I learned during SARS is, let’s not get caught flatfooted, let’s anticipate rather than react.”
==========

BlueDot uses an AI-driven algorithm that scours foreign-language news reports, animal and plant disease networks, and official proclamations to give its clients advance warning to avoid danger zones like Wuhan.
Speed matters during an outbreak, and tight-lipped Chinese officials do not have a good track record of sharing information about diseases, air pollution, or natural disasters. But public health officials at WHO and the CDC have to rely on these very same health officials for their own disease monitoring. So maybe an AI can get there faster. “We know that governments may not be relied upon to provide information in a timely fashion,” says Kamran Khan, BlueDot’s founder and CEO. “We can pick up news of possible outbreaks, little murmurs or forums or blogs of indications of some kind of unusual events going on.”
Khan says the algorithm doesn’t use social media postings because that data is too messy. But he does have one trick up his sleeve: access to global airline ticketing data that can help predict where and when infected residents are headed next. It correctly predicted that the virus would jump from Wuhan to Bangkok, Seoul, Taipei, and Tokyo in the days following its initial appearance.
Khan, who was working as a hospital infectious disease specialist in Toronto during the SARS epidemic of 2003, dreamt of finding a better way to track diseases. That virus started in provincial China and spread to Hong Kong and then to Toronto, where it killed 44 people. “There’s a bit of deja vu right now,” Khan says about the coronavirus outbreak today. “In 2003, I watched the virus overwhelm the city and cripple the hospital. There was an enormous amount of mental and physical fatigue, and I thought, ‘Let’s not do this again.’”
After testing out several predictive programs, Khan launched BlueDot in 2014 and raised $9.4 million in venture capital funding. The company now has 40 employees—physicians and programmers who devise the disease surveillance analytic program, which uses natural-language processing and machine learning techniques to sift through news reports in 65 languages, along with airline data and reports of animal disease outbreaks. “What we have done is use natural language processing and machine learning to train this engine to recognize whether this is an outbreak of anthrax in Mongolia versus a reunion of the heavy metal band Anthrax,” Kahn says.
Once the automated data-sifting is complete, human analysis takes over, Khan says. Epidemiologists check that the conclusions make sense from a scientific standpoint, and then a report is sent to government, business, and public health clients.
BlueDot’s reports are then sent to public health officials in a dozen countries (including the US and Canada), airlines, and frontline hospitals where infected patients might end up. BlueDot doesn’t sell their data to the general public, but they are working on it, Khan says.
The firm isn’t the first to look for an end-run around public health officials, but they are hoping to do better than Google Flu Trends, which was euthanized after underestimating the severity of the 2013 flu season by 140 percent. BlueDot successfully predicted the location of the Zika outbreak in South Florida in a publication in the British medical journal The Lancet.

No comments:

Post a Comment

25 Years Later: Empowering Children in Today's World

  Miriam Mohamed September 11, 2001, is permanently etched into the American consciousness. For those old enough to remember, it brings back...